Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily transporter | NCTC13639_02392 | Not Available | Negative | 2216003 - 2217424 | 50523.3 |
| protein of uncharacterised function (duf2766) | NCTC13639_02393 | Not Available | Positive | 2217555 - 2217806 | 9102.04 |
| ferritin-like protein 2 | NCTC13639_02394 | Not Available | Negative | 2217946 - 2218449 | 19053.7 |
| dj-1 family protein | NCTC13639_02395 | Not Available | Positive | 2219002 - 2219559 | 19971.1 |
| l-arabinose abc transporter substrate-binding protein | NCTC13639_02396 | Not Available | Positive | 2219875 - 2220648 | 28438.4 |
| l-arabinose abc transporter substrate-binding protein | NCTC13639_02397 | Not Available | Positive | 2220611 - 2220865 | 8943.65 |
| l-arabinose transporter atp-binding protein | NCTC13639_02398 | Not Available | Positive | 2220980 - 2222494 | 55134.8 |
| l-arabinose abc transporter permease | NCTC13639_02399 | Not Available | Positive | 2222509 - 2223360 | 29752.4 |
| l-arabinose abc transporter permease | NCTC13639_02400 | Not Available | Positive | 2223354 - 2223494 | 5193.62 |
| trehalose phosphatase | NCTC13639_02401 | Not Available | Positive | 2223858 - 2224472 | 22392.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

