Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystine transporter subunit | NCTC13639_02318 | Not Available | Positive | 2166435 - 2167256 | 29750.0 |
| d-cysteine desulfhydrase | NCTC13639_02319 | Not Available | Positive | 2167364 - 2168350 | 35226.5 |
| cystine abc transporter permease | NCTC13639_02320 | Not Available | Positive | 2168372 - 2169040 | 24792.8 |
| putative amino-acid abc transporter atp-binding protein yecc | NCTC13639_02321 | Not Available | Positive | 2169037 - 2169789 | 27771.0 |
| dna-binding transcriptional activator sdia | NCTC13639_02322 | Not Available | Positive | 2170020 - 2170742 | 27892.5 |
| protein of uncharacterised function (duf2594) | NCTC13639_02323 | Not Available | Negative | 2170809 - 2171033 | 8205.95 |
| response regulator | NCTC13639_02324 | Not Available | Positive | 2171493 - 2172149 | 23954.2 |
| uncharacterised protein | NCTC13639_02379 | Not Available | Negative | 2206556 - 2206900 | 12458.0 |
| uncharacterised protein | NCTC13639_02380 | Not Available | Positive | 2207346 - 2207795 | 16309.7 |
| polyketide cyclase / dehydrase and lipid transport | NCTC13639_02381 | Not Available | Positive | 2207809 - 2208279 | 18000.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

