Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | NCTC13639_02308 | Not Available | Positive | 2157838 - 2158251 | 15047.2 |
| cytoplasmic alpha-amylase | NCTC13639_02309 | Not Available | Negative | 2158292 - 2159779 | 56392.7 |
| flagellar protein flit | NCTC13639_02310 | Not Available | Negative | 2159848 - 2160219 | 13977.8 |
| flagellar protein flis | NCTC13639_02311 | Not Available | Negative | 2160219 - 2160626 | 14578.3 |
| flagellar filament cap protein | NCTC13639_02312 | Not Available | Negative | 2160642 - 2162042 | 49759.6 |
| flagellar flagellin | NCTC13639_02313 | Not Available | Positive | 2162298 - 2163548 | 43972.8 |
| flagellin lysine-n-methylase | NCTC13639_02314 | Not Available | Positive | 2163628 - 2163903 | 10253.3 |
| flagellin lysine-n-methylase | NCTC13639_02315 | Not Available | Positive | 2164045 - 2164830 | 30114.3 |
| flagellar-specific sigma f (sigma 28) factor | NCTC13639_02316 | Not Available | Positive | 2165027 - 2165746 | 27461.8 |
| flagella biosynthesis protein fliz | NCTC13639_02317 | Not Available | Positive | 2165804 - 2166355 | 21745.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

