Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 2134665 - 2134740 | Not Available |
| mlc titration factor a | NCTC13639_02278 | Not Available | Negative | 2134873 - 2135637 | 29297.7 |
| Trna-ser | Not Available | Not Available | Positive | 2135731 - 2135820 | Not Available |
| outer membrane porin protein | NCTC13639_02280 | Not Available | Negative | 2136759 - 2137949 | 43628.0 |
| phosphohydrolase | NCTC13639_02281 | Not Available | Positive | 2138391 - 2138954 | 21145.2 |
| dna cytosine methylase | NCTC13639_02282 | Not Available | Positive | 2139191 - 2140591 | 53319.4 |
| patch repair protein | NCTC13639_02283 | Not Available | Positive | 2140572 - 2141039 | 17778.3 |
| amino acid metabolite efflux | NCTC13639_02284 | Not Available | Negative | 2141031 - 2141951 | 32432.1 |
| inner membrane protein yedi | NCTC13639_02285 | Not Available | Positive | 2142130 - 2142903 | 27245.9 |
| uncharacterized small protein | NCTC13639_02286 | Not Available | Positive | 2143120 - 2143305 | 6890.17 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

