Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | NCTC13639_02147 | Not Available | Negative | 2041549 - 2042448 | 33206.6 |
| nucleotide sugar dehydrogenase | NCTC13639_02149 | Not Available | Positive | 2042815 - 2043639 | 29693.9 |
| lysr family transcriptional regulator | NCTC13639_02150 | Not Available | Positive | 2043681 - 2044610 | 34285.3 |
| amino acid permease | NCTC13639_02152 | Not Available | Positive | 2044880 - 2046241 | 49653.6 |
| exonuclease i | NCTC13639_02153 | Not Available | Negative | 2046301 - 2047731 | 54646.6 |
| dna gyrase inhibitor | NCTC13639_02220 | Not Available | Positive | 2091378 - 2091845 | 17926.3 |
| inner membrane protein yeea | NCTC13639_02221 | Not Available | Positive | 2091953 - 2093011 | 39701.7 |
| uncharacterized protein conserved in bacteria | NCTC13639_02222 | Not Available | Positive | 2093169 - 2093585 | 16068.5 |
| propanediol utilization protein pdux | NCTC13639_02223 | Not Available | Negative | 2093626 - 2094492 | 31735.1 |
| propionate kinase | NCTC13639_02224 | Not Available | Negative | 2094585 - 2095799 | 43725.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

