Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative udp-glucose lipid carrier transferase | NCTC13639_02116 | Not Available | Positive | 2011275 - 2012081 | 30378.4 |
| colanic acid exporter | NCTC13639_02117 | Not Available | Positive | 2012083 - 2013561 | 53768.8 |
| putative pyruvyl transferase | NCTC13639_02118 | Not Available | Positive | 2013585 - 2014865 | 47710.9 |
| colanic acid biosynthesis glycosyl transferase | NCTC13639_02119 | Not Available | Positive | 2014862 - 2016082 | 45056.1 |
| putative colanic acid biosynthesis protein | NCTC13639_02120 | Not Available | Positive | 2016094 - 2017488 | 51211.6 |
| utp--glucose-1-phosphate uridylyltransferase subunit galf | NCTC13639_02121 | Not Available | Positive | 2017654 - 2018547 | 32801.3 |
| uncharacterised protein | NCTC13639_02123 | Not Available | Positive | 2018877 - 2020376 | 56427.8 |
| glycosyltransferase wfao | NCTC13639_02124 | Not Available | Positive | 2020363 - 2021454 | 42080.7 |
| uncharacterised protein | NCTC13639_02125 | Not Available | Positive | 2021447 - 2022763 | 50529.6 |
| d-inositol-3-phosphate glycosyltransferase | NCTC13639_02126 | Not Available | Positive | 2022838 - 2023866 | 38640.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

