Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transport protein | NCTC13639_02096 | Not Available | Negative | 1992748 - 1994349 | 59751.2 |
| polysaccharide export protein | NCTC13639_02097 | Not Available | Positive | 1994988 - 1996127 | 41648.1 |
| tyrosine phosphatase | NCTC13639_02098 | Not Available | Positive | 1996133 - 1996582 | 16684.3 |
| tyrosine kinase | NCTC13639_02099 | Not Available | Positive | 1996579 - 1997091 | 18383.9 |
| tyrosine kinase | NCTC13639_02100 | Not Available | Positive | 1997131 - 1998768 | 60164.0 |
| putative glycosyl transferase | NCTC13639_02101 | Not Available | Positive | 1998815 - 1999657 | 33151.6 |
| acetyl transferase | NCTC13639_02102 | Not Available | Positive | 1999660 - 2000148 | 17543.5 |
| glycosyl transferase | NCTC13639_02103 | Not Available | Positive | 2000145 - 2001362 | 44822.0 |
| putative colanic acid biosynthesis protein | NCTC13639_02104 | Not Available | Positive | 2001337 - 2002554 | 45325.1 |
| colanic acid biosynthesis glycosyl transferase | NCTC13639_02105 | Not Available | Positive | 2002560 - 2003306 | 27534.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

