Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux system subunit mdtc | NCTC13639_02085 | Not Available | Negative | 1975649 - 1978729 | 111051.0 |
| multidrug efflux system subunit mdtb | NCTC13639_02086 | Not Available | Negative | 1978730 - 1980979 | 81459.3 |
| multidrug efflux system subunit mdtb | NCTC13639_02087 | Not Available | Negative | 1980996 - 1981853 | 30120.8 |
| multidrug resistance protein | NCTC13639_02088 | Not Available | Negative | 1981853 - 1983100 | 44275.5 |
| putative chaperone | NCTC13639_02090 | Not Available | Negative | 1983538 - 1984890 | 49217.8 |
| 3-methyl-adenine dna glycosylase ii | NCTC13639_02091 | Not Available | Positive | 1985027 - 1985896 | 31817.4 |
| putative sensor protein | NCTC13639_02092 | Not Available | Negative | 1985864 - 1989244 | 126498.0 |
| uridine kinase | NCTC13639_02093 | Not Available | Positive | 1989509 - 1990150 | 24450.6 |
| deoxycytidine triphosphate deaminase | NCTC13639_02094 | Not Available | Positive | 1990242 - 1990823 | 21255.4 |
| putative assembly protein | NCTC13639_02095 | Not Available | Positive | 1990850 - 1992703 | 68655.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

