Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrolide transporter atp-binding /permease protein | NCTC13639_02074 | Not Available | Positive | 1964662 - 1966608 | 70180.2 |
| cold shock-like protein cspd | NCTC13639_02075 | Not Available | Negative | 1966683 - 1966907 | 7956.37 |
| atp-dependent clp protease adaptor protein clps | NCTC13639_02076 | Not Available | Positive | 1967231 - 1967551 | 12164.7 |
| atp-dependent clp protease atp-binding subunit | NCTC13639_02077 | Not Available | Positive | 1967582 - 1969858 | 84185.7 |
| protease | NCTC13639_02079 | Not Available | Negative | 1970128 - 1971489 | 51337.3 |
| uncharacterized conserved protein | NCTC13639_02080 | Not Available | Negative | 1971649 - 1971981 | 11998.0 |
| dna-binding transcriptional regulator baer | NCTC13639_02081 | Not Available | Negative | 1972117 - 1972839 | 27635.6 |
| signal transduction histidine-protein kinase baes | NCTC13639_02082 | Not Available | Negative | 1972836 - 1973522 | 25088.9 |
| signal transduction histidine-protein kinase baes | NCTC13639_02083 | Not Available | Negative | 1973512 - 1974240 | 27346.9 |
| multidrug efflux system protein mdte | NCTC13639_02084 | Not Available | Negative | 1974240 - 1975652 | 50921.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

