Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine transporter permease subunit artm | NCTC13639_02054 | Not Available | Negative | 1942993 - 1943661 | 24768.1 |
| arginine transporter permease subunit artq | NCTC13639_02055 | Not Available | Negative | 1943661 - 1944377 | 26211.8 |
| arginine abc transporter substrate-binding protein | NCTC13639_02056 | Not Available | Negative | 1944384 - 1945115 | 26968.0 |
| arginine transporter atp-binding subunit | NCTC13639_02057 | Not Available | Negative | 1945132 - 1945860 | 26978.7 |
| putative lipoprotein | NCTC13639_02058 | Not Available | Negative | 1946086 - 1946601 | 18914.1 |
| domain of uncharacterised function (duf74) | NCTC13639_02059 | Not Available | Positive | 1946728 - 1946880 | 5826.03 |
| n-acetylmuramoyl-l-alanine amidase | NCTC13639_02060 | Not Available | Positive | 1947049 - 1947879 | 30948.3 |
| cholesterol dehydrogenase | NCTC13639_02061 | Not Available | Negative | 1947985 - 1948998 | 37882.5 |
| short chain dehydrogenase | NCTC13639_02062 | Not Available | Negative | 1949096 - 1950526 | 53703.4 |
| low specificity l-threonine aldolase | NCTC13639_02063 | Not Available | Negative | 1950537 - 1951538 | 36469.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

