Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna synthetase | NCTC13639_02033 | Not Available | Negative | 1924381 - 1926414 | 76165.8 |
| putative atpase | NCTC13639_02034 | Not Available | Positive | 1926579 - 1927688 | 39814.3 |
| protein of uncharacterised function (duf2574) | NCTC13639_02035 | Not Available | Positive | 1927953 - 1928234 | 9742.7 |
| major fimbrial subunit | NCTC13639_02036 | Not Available | Positive | 1928512 - 1929066 | 19110.7 |
| fimbrial chaperone protein | NCTC13639_02037 | Not Available | Positive | 1929114 - 1929797 | 25016.7 |
| fimbrial usher protein | NCTC13639_02038 | Not Available | Positive | 1929810 - 1931723 | 72301.1 |
| fimbrial usher protein | NCTC13639_02039 | Not Available | Positive | 1931943 - 1932290 | 12735.0 |
| uncharacterised protein | NCTC13639_02040 | Not Available | Positive | 1932300 - 1933337 | 39191.9 |
| nickel/cobalt homeostasis protein rcnb precursor | NCTC13639_02041 | Not Available | Negative | 1933389 - 1933721 | 12182.7 |
| hydroxyethylthiazole kinase | NCTC13639_02043 | Not Available | Positive | 1934084 - 1934866 | 27048.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

