Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-s-transferase | NCTC13639_02013 | Not Available | Positive | 1903421 - 1904065 | 23975.8 |
| salicylate hydroxylase | NCTC13639_02014 | Not Available | Positive | 1904080 - 1905273 | 44052.5 |
| pp_01935 | NCTC13639_02015 | Not Available | Positive | 1905335 - 1906273 | Not Available |
| biotin synthesis protein | NCTC13639_02016 | Not Available | Negative | 1906496 - 1907230 | 27396.5 |
| multidrug resistance outer membrane protein mdtq | NCTC13639_02017 | Not Available | Positive | 1907472 - 1908839 | 49608.1 |
| inner membrane protein yohd | NCTC13639_02018 | Not Available | Negative | 1908877 - 1909446 | 21065.5 |
| inner membrane protein yohc | NCTC13639_02019 | Not Available | Positive | 1909689 - 1910312 | 22722.1 |
| d-alanyl-d-alanine endopeptidase | NCTC13639_02020 | Not Available | Positive | 1910458 - 1911405 | 34251.8 |
| d-lactate dehydrogenase | NCTC13639_02021 | Not Available | Negative | 1911470 - 1913179 | 64299.6 |
| periplasmic beta-glucosidase | NCTC13639_02022 | Not Available | Positive | 1913412 - 1915709 | 83460.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

