Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | NCTC13639_02003 | Not Available | Negative | 1894427 - 1895668 | 44620.7 |
| protein of uncharacterised function (duf2542) | NCTC13639_02004 | Not Available | Negative | 1895902 - 1896141 | 9267.48 |
| vancomycin high temperature exclusion protein | NCTC13639_02005 | Not Available | Negative | 1896144 - 1896863 | 27339.4 |
| cytidine deaminase | NCTC13639_02006 | Not Available | Negative | 1896998 - 1897882 | 31734.8 |
| inner membrane protein yohk | NCTC13639_02007 | Not Available | Negative | 1898031 - 1898726 | 24383.0 |
| putative effector of murein hydrolase lrga | NCTC13639_02008 | Not Available | Negative | 1898723 - 1899121 | 14615.7 |
| transcriptional regulator | NCTC13639_02009 | Not Available | Negative | 1899253 - 1900161 | 33612.1 |
| 3-hydroxyphenylpropionic acid transporter | NCTC13639_02010 | Not Available | Positive | 1900288 - 1901646 | 48244.3 |
| gentisate 1,2-dioxygenase | NCTC13639_02011 | Not Available | Positive | 1901658 - 1902695 | 39190.3 |
| faa-hydrolase-family protein | NCTC13639_02012 | Not Available | Positive | 1902711 - 1903412 | 25969.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

