Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside transporter | NCTC13639_01983 | Not Available | Positive | 1872170 - 1872628 | 15593.3 |
| pyrimidine kinase | NCTC13639_01984 | Not Available | Negative | 1872675 - 1873763 | 39985.9 |
| endonuclease iv | NCTC13639_01985 | Not Available | Negative | 1873766 - 1874623 | 31549.3 |
| uncharacterised protein | NCTC13639_01986 | Not Available | Negative | 1874695 - 1875744 | 36858.4 |
| putative dna-binding transcriptional regulator | NCTC13639_01987 | Not Available | Positive | 1875923 - 1876804 | 32634.4 |
| lysine transporter | NCTC13639_01988 | Not Available | Positive | 1877000 - 1878469 | 53657.1 |
| putative outer membrane receptor | NCTC13639_01989 | Not Available | Negative | 1878534 - 1880519 | 73161.8 |
| regulatory protein uhpc | NCTC13639_01990 | Not Available | Negative | 1880853 - 1882175 | 48648.4 |
| phosphoserine phosphatase | NCTC13639_01991 | Not Available | Negative | 1882207 - 1883094 | 33257.2 |
| l-serine deaminase 1 | NCTC13639_01992 | Not Available | Positive | 1883377 - 1884681 | 47122.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

