Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransfer intermediate protein in two-component regulatory system with rcsbc | NCTC13639_01912 | Not Available | Negative | 1803262 - 1805931 | 99957.6 |
| outer membrane protein c | NCTC13639_01914 | Not Available | Positive | 1806670 - 1807698 | 37561.0 |
| thiamine biosynthesis lipoprotein apbe | NCTC13639_01915 | Not Available | Positive | 1807887 - 1808381 | 17877.4 |
| thiamine biosynthesis lipoprotein apbe | NCTC13639_01916 | Not Available | Positive | 1808374 - 1808940 | 20830.7 |
| adaptative response regulatory protein ada | NCTC13639_01917 | Not Available | Positive | 1809020 - 1810003 | 36046.8 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | NCTC13639_01918 | Not Available | Positive | 1810085 - 1810735 | 23784.5 |
| multidrug transporter membrane component/atp-binding component | NCTC13639_01919 | Not Available | Positive | 1810811 - 1811734 | 34446.6 |
| multidrug transporter membrane component/atp-binding component | NCTC13639_01920 | Not Available | Positive | 1811793 - 1812455 | 24838.1 |
| magnesium transporter | NCTC13639_01921 | Not Available | Positive | 1812561 - 1813997 | 52877.7 |
| membrane transport protein | NCTC13639_01922 | Not Available | Negative | 1813960 - 1814706 | 25855.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

