Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | NCTC13639_01892 | Not Available | Negative | 1779252 - 1780127 | 32601.7 |
| tdp-4-oxo-6-deoxy-d-glucose transaminase | NCTC13639_01893 | Not Available | Negative | 1780157 - 1781377 | 44591.8 |
| nudix-family hydrolase | NCTC13639_01894 | Not Available | Negative | 1781662 - 1782087 | 16057.2 |
| yfaz precursor | NCTC13639_01895 | Not Available | Positive | 1782405 - 1782947 | 18585.7 |
| uncharacterised protein | NCTC13639_01896 | Not Available | Positive | 1782886 - 1783062 | 6258.72 |
| competence damage-inducible protein a | NCTC13639_01897 | Not Available | Positive | 1783028 - 1784224 | 44080.1 |
| transposase | NCTC13639_01898 | Not Available | Negative | 1784263 - 1784463 | 7421.04 |
| sn-glycerol-3-phosphate dehydrogenase subunit c | NCTC13639_01899 | Not Available | Negative | 1784783 - 1785973 | 44200.4 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | NCTC13639_01900 | Not Available | Negative | 1785970 - 1787229 | 45592.0 |
| sn-glycerol-3-phosphate dehydrogenase subunit a | NCTC13639_01901 | Not Available | Negative | 1787219 - 1788847 | 59202.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

