Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | NCTC13639_02368 | Not Available | Positive | 2196841 - 2198376 | 54268.9 |
| Tail fiber assembly protein | NCTC13639_02369 | Not Available | Positive | 2198381 - 2198797 | 15352.0 |
| Dna invertase | NCTC13639_02370 | Not Available | Positive | 2198801 - 2199028 | 8611.4 |
| Tail protein | NCTC13639_02371 | Not Available | Negative | 2199036 - 2199524 | 18150.7 |
| Tail tape measure protein | NCTC13639_02372 | Not Available | Negative | 2199534 - 2202473 | 103095.0 |
| Tail protein | NCTC13639_02373 | Not Available | Negative | 2202636 - 2202935 | 10461.5 |
| Major tail tube protein | NCTC13639_02374 | Not Available | Negative | 2202989 - 2203504 | 18702.5 |
| Tail sheath subtilisin-like domain-containing protein | NCTC13639_02375 | Not Available | Negative | 2203505 - 2204686 | 43085.1 |
| Late control d family protein | NCTC13639_02376 | Not Available | Positive | 2204838 - 2205161 | 11534.6 |
| Late control d family protein | NCTC13639_02377 | Not Available | Positive | 2205333 - 2205992 | 24396.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

