Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function, duf462 | NCTC13639_01822 | Not Available | Positive | 1709297 - 1709845 | 21334.9 |
| yfcl protein | NCTC13639_01823 | Not Available | Positive | 1709878 - 1710153 | 9969.63 |
| 5-methylaminomethyl-2-thiouridine methyltransferase | NCTC13639_01824 | Not Available | Negative | 1710268 - 1712268 | 73214.9 |
| 3-oxoacyl-(acyl carrier protein) synthase i | NCTC13639_01825 | Not Available | Positive | 1712428 - 1713642 | 42257.4 |
| major facilitator superfamily protein | NCTC13639_01826 | Not Available | Positive | 1713856 - 1715034 | 40650.8 |
| flagella biosynthesis regulator | NCTC13639_01827 | Not Available | Negative | 1715031 - 1716035 | 37149.9 |
| erythronate-4-phosphate dehydrogenase | NCTC13639_01828 | Not Available | Positive | 1716141 - 1717277 | 41059.5 |
| putative semialdehyde dehydrogenase | NCTC13639_01829 | Not Available | Positive | 1717346 - 1718359 | 36450.2 |
| trna pseudouridine synthase a | NCTC13639_01830 | Not Available | Positive | 1718359 - 1719171 | 30382.2 |
| snare associated golgi protein | NCTC13639_01831 | Not Available | Positive | 1719196 - 1719855 | 24442.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

