Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | NCTC13639_01701 | Not Available | Positive | 1594807 - 1595316 | 17949.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | NCTC13639_01702 | Not Available | Positive | 1595428 - 1596141 | 26984.5 |
| peptidase | NCTC13639_01703 | Not Available | Positive | 1596270 - 1597136 | 31358.8 |
| atp-dependent acetyltransferase | NCTC13639_01704 | Not Available | Positive | 1597152 - 1597535 | 13666.4 |
| atp-dependent acetyltransferase | NCTC13639_01705 | Not Available | Positive | 1597576 - 1599168 | 58796.5 |
| esterase ypfh | NCTC13639_01706 | Not Available | Positive | 1599242 - 1599823 | 20865.9 |
| uncharacterised protein | NCTC13639_01707 | Not Available | Negative | 1600045 - 1600245 | 8033.68 |
| succinyl-diaminopimelate desuccinylase | NCTC13639_01708 | Not Available | Negative | 1600273 - 1601400 | 41433.7 |
| glutaredoxin | NCTC13639_01709 | Not Available | Negative | 1601404 - 1601760 | 13422.2 |
| aminoglycoside/multidrug efflux system | NCTC13639_01711 | Not Available | Negative | 1602571 - 1605396 | 103201.0 |
Pathways
871 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

