Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | NCTC13639_01691 | Not Available | Negative | 1586823 - 1588286 | 53905.1 |
| permease | NCTC13639_01692 | Not Available | Positive | 1588513 - 1589577 | 39358.1 |
| transporter | NCTC13639_01693 | Not Available | Positive | 1589744 - 1590403 | 23436.7 |
| transporter | NCTC13639_01694 | Not Available | Positive | 1590405 - 1590866 | 16024.4 |
| isoaspartyl dipeptidase | NCTC13639_01695 | Not Available | Positive | 1590878 - 1591762 | 31343.0 |
| thioredoxin-dependent thiol peroxidase | NCTC13639_01696 | Not Available | Negative | 1592193 - 1592663 | 17625.9 |
| glycine cleavage system transcriptional repressor | NCTC13639_01697 | Not Available | Negative | 1592663 - 1592875 | 7538.67 |
| glycine cleavage system transcriptional repressor | NCTC13639_01698 | Not Available | Negative | 1592926 - 1593174 | 8791.65 |
| dihydrodipicolinate synthase | NCTC13639_01699 | Not Available | Positive | 1593420 - 1594154 | 26214.6 |
| lipoprotein | NCTC13639_01700 | Not Available | Positive | 1594338 - 1594685 | 12107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

