Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative portal vertex protein | NCTC13639_02348 | Not Available | Negative | 2185422 - 2186474 | 39248.6 |
| Helix-turn-helix domain-containing protein | NCTC13639_02349 | Not Available | Negative | 2186538 - 2186855 | 11887.3 |
| Helix-turn-helix domain-containing protein | NCTC13639_02350 | Not Available | Negative | 2186800 - 2187213 | 15837.2 |
| Helix-turn-helix domain-containing protein | NCTC13639_02351 | Not Available | Negative | 2187204 - 2187434 | 8733.3 |
| Helix-turn-helix domain-containing protein | NCTC13639_02352 | Not Available | Negative | 2187452 - 2188039 | 22578.8 |
| Gpo family capsid scaffolding protein | NCTC13639_02353 | Not Available | Positive | 2188357 - 2188557 | 7428.79 |
| Gpo family capsid scaffolding protein | NCTC13639_02354 | Not Available | Positive | 2188735 - 2189187 | 16655.3 |
| Major capsid protein, p2 family | NCTC13639_02355 | Not Available | Positive | 2189211 - 2190179 | 35595.3 |
| Terminase | NCTC13639_02356 | Not Available | Positive | 2190308 - 2191228 | 33405.0 |
| Head completion/stabilization protein | NCTC13639_02357 | Not Available | Positive | 2191274 - 2191462 | 6775.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

