Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intimin | NCTC13639_01649 | Not Available | Positive | 1543189 - 1544610 | 52125.8 |
| intimin-like protein sinh | NCTC13639_01650 | Not Available | Positive | 1544669 - 1545625 | 33772.9 |
| outer membrane protein rata | NCTC13639_01651 | Not Available | Positive | 1545759 - 1547426 | 58773.4 |
| outer membrane protein rata | NCTC13639_01652 | Not Available | Positive | 1547444 - 1551322 | 137943.0 |
| outer membrane protein ratb | NCTC13639_01653 | Not Available | Positive | 1551444 - 1551848 | 14911.0 |
| exodeoxyribonuclease vii large subunit | NCTC13639_01654 | Not Available | Negative | 1551841 - 1553214 | 51846.3 |
| inosine 5'-monophosphate dehydrogenase | NCTC13639_01655 | Not Available | Positive | 1553264 - 1554841 | 56037.5 |
| gmp synthase | NCTC13639_01656 | Not Available | Positive | 1554905 - 1556482 | 58805.7 |
| integrase | NCTC13639_01657 | Not Available | Positive | 1556787 - 1557989 | 45332.3 |
| predicted transcriptional regulator | NCTC13639_01658 | Not Available | Positive | 1558137 - 1558358 | 8410.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

