Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | NCTC13639_01587 | Not Available | Positive | 1492176 - 1492916 | 27413.2 |
| rok-family regulatory protein | NCTC13639_01588 | Not Available | Negative | 1493074 - 1494267 | 44192.7 |
| tpr-domain protein | NCTC13639_01589 | Not Available | Positive | 1494382 - 1497648 | 122938.0 |
| sugar transporter | NCTC13639_01590 | Not Available | Positive | 1497722 - 1499161 | 51569.1 |
| aldose 1-epimerase | NCTC13639_01591 | Not Available | Positive | 1499161 - 1500003 | 31464.6 |
| putative 3-phenylpropionic acid transporter | NCTC13639_01592 | Not Available | Positive | 1500092 - 1501240 | 41796.1 |
| stationary phase inducible protein csie | NCTC13639_01593 | Not Available | Negative | 1501235 - 1502512 | 48750.2 |
| uncharacterised protein | NCTC13639_01594 | Not Available | Positive | 1502722 - 1502859 | 5244.61 |
| d-arabinose 5-phosphate isomerase | NCTC13639_01595 | Not Available | Negative | 1502836 - 1503435 | 20850.3 |
| carbohydrate kinase | NCTC13639_01596 | Not Available | Negative | 1503432 - 1504430 | 35932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

