Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoe | NCTC13639_01554 | Not Available | Positive | 1460350 - 1460925 | 21727.0 |
| anti-rna polymerase sigma factor sige | NCTC13639_01555 | Not Available | Positive | 1460891 - 1461607 | 26601.8 |
| periplasmic negative regulator of sigmae | NCTC13639_01556 | Not Available | Positive | 1461607 - 1462563 | 35808.8 |
| soxr reducing system protein rsec | NCTC13639_01557 | Not Available | Positive | 1462560 - 1463024 | 16147.8 |
| gtp-binding protein lepa | NCTC13639_01558 | Not Available | Positive | 1463295 - 1465094 | 66622.2 |
| signal peptidase i | NCTC13639_01559 | Not Available | Positive | 1465110 - 1465385 | 10507.0 |
| signal peptidase i | NCTC13639_01560 | Not Available | Positive | 1465385 - 1466083 | 26013.0 |
| gtp-binding protein era | NCTC13639_01562 | Not Available | Positive | 1467030 - 1467935 | 33769.9 |
| dna repair protein | NCTC13639_01563 | Not Available | Positive | 1467963 - 1468691 | 27216.8 |
| pyridoxine 5'-phosphate synthase | NCTC13639_01564 | Not Available | Positive | 1468703 - 1469434 | 26457.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

