Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 1409313 - 1412218 | Not Available |
| large repetitive protein | NCTC13639_01501 | Not Available | Negative | 1403763 - 1410608 | 229536.0 |
| large repetitive protein | NCTC13639_01502 | Not Available | Negative | 1410671 - 1411516 | 27804.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1412311 - 1412425 | Not Available |
| large repetitive protein | NCTC13639_01503 | Not Available | Negative | 1411624 - 1414959 | 111530.0 |
| ssra small binding protein b | NCTC13639_01504 | Not Available | Negative | 1415542 - 1416024 | 18184.0 |
| ribosome association toxin rata | NCTC13639_01505 | Not Available | Positive | 1416179 - 1416622 | 16383.8 |
| uncharacterised protein family (upf0125) | NCTC13639_01506 | Not Available | Positive | 1416606 - 1416902 | 11008.4 |
| outer membrane assembly lipoprotein | NCTC13639_01507 | Not Available | Negative | 1416953 - 1417297 | 12506.0 |
| recombination and repair protein | NCTC13639_01508 | Not Available | Negative | 1417447 - 1419108 | 61408.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

