Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | NCTC13639_01419 | Not Available | Positive | 1331275 - 1331619 | 12736.9 |
| oxidoreductase | NCTC13639_01420 | Not Available | Positive | 1331963 - 1332949 | 36181.1 |
| d-ribose transporter subunit rbsb | NCTC13639_01421 | Not Available | Positive | 1332988 - 1333917 | 32858.5 |
| abc transporter atp-binding protein | NCTC13639_01422 | Not Available | Positive | 1333969 - 1334499 | 18748.1 |
| d-ribose transporter atp binding protein | NCTC13639_01423 | Not Available | Positive | 1334468 - 1335517 | 38320.1 |
| ribose abc transporter permease protein | NCTC13639_01424 | Not Available | Positive | 1335529 - 1336557 | 36391.8 |
| oxidoreductase | NCTC13639_01425 | Not Available | Positive | 1336588 - 1337700 | 40430.5 |
| aminoimidazole riboside kinase | NCTC13639_01426 | Not Available | Positive | 1337713 - 1338591 | 31749.9 |
| uncharacterized protein conserved in bacteria | NCTC13639_01427 | Not Available | Positive | 1338557 - 1339618 | 39441.3 |
| inosose dehydratase | NCTC13639_01428 | Not Available | Positive | 1339716 - 1340522 | 29764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

