Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopropionate ammonia-lyase | NCTC13639_01399 | Not Available | Positive | 1309699 - 1310913 | 43915.5 |
| peptidase | NCTC13639_01400 | Not Available | Positive | 1310946 - 1312130 | 43130.0 |
| n-acyl-d-amino-acid deacylase | NCTC13639_01401 | Not Available | Positive | 1312198 - 1313790 | 58031.9 |
| major facilitator superfamily transporter | NCTC13639_01402 | Not Available | Positive | 1313869 - 1315155 | 46231.1 |
| dna-binding transcriptional activator evga | NCTC13639_01403 | Not Available | Positive | 1315626 - 1316240 | 22817.4 |
| uncharacterised protein | NCTC13639_01404 | Not Available | Positive | 1316245 - 1316463 | 8178.0 |
| aerobic respiration control sensor protein arcb | NCTC13639_01405 | Not Available | Positive | 1316507 - 1319488 | 110881.0 |
| yfdx protein | NCTC13639_01406 | Not Available | Negative | 1319563 - 1320195 | 22031.7 |
| acid-resistance membrane protein | NCTC13639_01407 | Not Available | Positive | 1320477 - 1320911 | 16569.0 |
| 10k-l protein | NCTC13639_01408 | Not Available | Positive | 1321095 - 1321421 | 11936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

