Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | NCTC13639_01277 | Not Available | Negative | 1196635 - 1197552 | 33530.0 |
| uncharacterised protein | NCTC13639_01278 | Not Available | Negative | 1197733 - 1197981 | 8901.55 |
| uncharacterised protein | NCTC13639_01279 | Not Available | Negative | 1197944 - 1198507 | 20725.7 |
| uncharacterised protein | NCTC13639_01280 | Not Available | Negative | 1198518 - 1198976 | 17279.2 |
| outer membrane protein (porin) | NCTC13639_01281 | Not Available | Negative | 1199137 - 1199460 | 12381.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | NCTC13639_01282 | Not Available | Positive | 1199966 - 1200592 | 23529.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | NCTC13639_01283 | Not Available | Positive | 1200600 - 1201337 | 26474.0 |
| dna-binding transcriptional regulator hexr | NCTC13639_01284 | Not Available | Negative | 1201384 - 1202277 | 33974.8 |
| c4-dicarboxylate transporter | NCTC13639_01285 | Not Available | Positive | 1202631 - 1203998 | 47929.5 |
| malate dehydrogenase | NCTC13639_01286 | Not Available | Positive | 1204052 - 1205746 | 62253.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

