Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | NCTC13639_02204 | Not Available | Positive | 2079288 - 2079479 | 7045.71 |
| uncharacterised protein | NCTC13639_02205 | Not Available | Positive | 2079492 - 2079857 | 13512.3 |
| Baseplate assembly protein | NCTC13639_02206 | Not Available | Positive | 2079923 - 2080675 | 26728.6 |
| Putative baseplate component | NCTC13639_02207 | Not Available | Positive | 2080675 - 2081028 | 13441.7 |
| Gp61 putative baseplate protein | NCTC13639_02208 | Not Available | Positive | 2081029 - 2082228 | 40979.0 |
| Hypothetical protein | NCTC13639_02209 | Not Available | Positive | 2082225 - 2082905 | 24759.1 |
| Tail fiber protein | NCTC13639_02210 | Not Available | Positive | 2082905 - 2084050 | 40060.0 |
| Tail fiber assembly protein | NCTC13639_02211 | Not Available | Positive | 2084055 - 2084471 | 15352.0 |
| Dna invertase | NCTC13639_02212 | Not Available | Positive | 2084546 - 2085097 | 20565.0 |
| uncharacterised protein | NCTC13639_02213 | Not Available | Negative | 2085228 - 2085470 | 8967.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

