Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease v subunit gamma | NCTC13639_01164 | Not Available | Positive | 1068290 - 1071658 | 129189.0 |
| protease iii precursor (pitrilysin) | NCTC13639_01165 | Not Available | Positive | 1071838 - 1072506 | 24299.9 |
| protease iii precursor (pitrilysin) | NCTC13639_01166 | Not Available | Positive | 1072529 - 1074727 | 82223.9 |
| exonuclease v subunit beta | NCTC13639_01167 | Not Available | Positive | 1074720 - 1078265 | 133360.0 |
| exonuclease v subunit alpha | NCTC13639_01168 | Not Available | Positive | 1078262 - 1080091 | 66253.5 |
| amino-acid acetyltransferase | NCTC13639_01169 | Not Available | Negative | 1080216 - 1081547 | 49455.6 |
| n-acetylmuramoyl-l-alanine amidase | NCTC13639_01170 | Not Available | Positive | 1081782 - 1082762 | 36261.3 |
| Trna-undet | Not Available | Not Available | Positive | 1083110 - 1083185 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1083229 - 1083305 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1083354 - 1083430 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

