Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein | NCTC13639_01154 | Not Available | Negative | 1060323 - 1061018 | 25719.3 |
| (di)nucleoside polyphosphate hydrolase | NCTC13639_01155 | Not Available | Positive | 1061703 - 1062233 | 20784.0 |
| fused phosphoenolpyruvate-protein phosphotransferase ptsp/gaf domain | NCTC13639_01156 | Not Available | Positive | 1062246 - 1064576 | 87053.7 |
| prolipoprotein diacylglyceryl transferase | NCTC13639_01157 | Not Available | Positive | 1064976 - 1065554 | 21759.0 |
| thymidylate synthase | NCTC13639_01158 | Not Available | Positive | 1065561 - 1065734 | 6628.99 |
| thymidylate synthase | NCTC13639_01159 | Not Available | Positive | 1065748 - 1066356 | 23125.3 |
| prepilin peptidase-dependent protein a | NCTC13639_01160 | Not Available | Positive | 1066540 - 1066983 | 16469.8 |
| prepilin peptidase-dependent protein b | NCTC13639_01161 | Not Available | Positive | 1067002 - 1067565 | 20656.8 |
| protein of uncharacterised function (duf2509) | NCTC13639_01162 | Not Available | Positive | 1067562 - 1067969 | 15160.5 |
| prepilin peptidase-dependent protein c | NCTC13639_01163 | Not Available | Positive | 1067954 - 1068277 | 12453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

