Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt efflux protein rcna | NCTC13639_01132 | Not Available | Negative | 1038191 - 1039219 | 37871.5 |
| transcriptional repressor rcnr | NCTC13639_01133 | Not Available | Positive | 1039339 - 1039611 | 10123.4 |
| membrane protein | NCTC13639_01134 | Not Available | Negative | 1040354 - 1041583 | 44890.6 |
| predicted membrane protein | NCTC13639_01135 | Not Available | Negative | 1041726 - 1042181 | 17533.7 |
| putative dna-binding transcriptional regulator | NCTC13639_01136 | Not Available | Positive | 1042283 - 1043167 | 32789.3 |
| acetyl-coa acetyltransferase | NCTC13639_01137 | Not Available | Positive | 1043270 - 1044448 | 41327.6 |
| 5-keto-4-deoxyuronate isomerase | NCTC13639_01138 | Not Available | Positive | 1044919 - 1045755 | 31130.3 |
| 2-deoxy-d-gluconate 3-dehydrogenase | NCTC13639_01139 | Not Available | Positive | 1045813 - 1046574 | 27114.6 |
| arabinose-proton symporter | NCTC13639_01140 | Not Available | Positive | 1046890 - 1048308 | 51691.6 |
| pectin degradation protein | NCTC13639_01141 | Not Available | Negative | 1048381 - 1048707 | 12178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

