Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain | NCTC13639_01061 | Not Available | Positive | 978310 - 979290 | 37830.6 |
| eal domain | NCTC13639_01062 | Not Available | Positive | 979612 - 980841 | 47079.2 |
| is1 transposase | NCTC13639_01063 | Not Available | Negative | 980876 - 981142 | 10427.9 |
| transposase and inactivated derivatives | NCTC13639_01064 | Not Available | Negative | 981296 - 981571 | 9902.97 |
| rnase ii stability modulator | NCTC13639_01065 | Not Available | Positive | 981794 - 984385 | 97673.1 |
| integrase core domain | NCTC13639_01066 | Not Available | Negative | 984413 - 985117 | 27896.9 |
| site-specific dna recombinase | NCTC13639_01067 | Not Available | Negative | 985202 - 985759 | 21224.5 |
| isec14 transposase b | NCTC13639_01069 | Not Available | Positive | 986972 - 987178 | 8078.32 |
| uncharacterised protein | NCTC13639_01070 | Not Available | Negative | 987171 - 987488 | 12068.7 |
| methyl-accepting chemotaxis protein iii (ribose an galactose chemoreceptor protein) | NCTC13639_01071 | Not Available | Negative | 987588 - 989225 | 58945.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

