Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease i | NCTC13639_00978 | Not Available | Negative | 893609 - 894316 | 26686.3 |
| peptidase | NCTC13639_00979 | Not Available | Negative | 894411 - 894908 | 19318.7 |
| galactose-proton symporter (galactose transporter) | NCTC13639_00980 | Not Available | Negative | 894986 - 896380 | 50960.6 |
| s-adenosylmethionine synthetase | NCTC13639_00981 | Not Available | Negative | 896780 - 897934 | 41902.9 |
| biosynthetic arginine decarboxylase | NCTC13639_00982 | Not Available | Positive | 898722 - 900698 | 73824.3 |
| agmatinase | NCTC13639_00983 | Not Available | Positive | 900936 - 901856 | 33577.9 |
| peptidase | NCTC13639_00984 | Not Available | Negative | 902053 - 902811 | 26671.7 |
| transketolase | NCTC13639_00985 | Not Available | Positive | 903091 - 905082 | 71974.3 |
| putrescine/spermidine abc transporter atpase protein | NCTC13639_00986 | Not Available | Negative | 905142 - 905792 | 23945.9 |
| cobalt transport atp-binding protein | NCTC13639_00987 | Not Available | Negative | 905786 - 906463 | 24885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

