Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | NCTC13639_00968 | Not Available | Negative | 886444 - 887580 | 42564.4 |
| putative deoxyribonucleotide triphosphate pyrophosphatase | NCTC13639_00969 | Not Available | Negative | 887573 - 888166 | 20976.8 |
| uncharacterised acr, yggu family cog1872 | NCTC13639_00970 | Not Available | Negative | 888174 - 888464 | 10414.7 |
| yggt family | NCTC13639_00971 | Not Available | Negative | 888461 - 889027 | 21110.4 |
| amino acid racemase | NCTC13639_00972 | Not Available | Negative | 889046 - 889750 | 25666.7 |
| type ii secretion system, atp-binding, protein | NCTC13639_00973 | Not Available | Positive | 889768 - 890748 | 35895.1 |
| holliday junction resolvase-like protein | NCTC13639_00974 | Not Available | Negative | 890745 - 891164 | 15306.3 |
| uncharacterized acr, cog1678 | NCTC13639_00975 | Not Available | Negative | 891161 - 891724 | 20796.2 |
| glutathione synthetase | NCTC13639_00976 | Not Available | Negative | 891836 - 892783 | 35437.9 |
| 16s ribosomal rna methyltransferase rsme | NCTC13639_00977 | Not Available | Negative | 892803 - 893534 | 26948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

