Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 2059149 - 2059224 | Not Available |
| Trna,type:pseudo,anti_codon:aaa; | Not Available | Not Available | Positive | 2059227 - 2059299 | Not Available |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 2059302 - 2059377 | Not Available |
| Trna,type:gly,anti_codon:tcc; | Not Available | Not Available | Positive | 2059382 - 2059456 | Not Available |
| Holin | NCTC13639_02178 | Not Available | Positive | 2059801 - 2060079 | 10147.2 |
| Lysin | NCTC13639_02179 | Not Available | Positive | 2060051 - 2060599 | 19929.1 |
| Phage-tail assembly-like protein | NCTC13639_02180 | Not Available | Positive | 2060596 - 2061156 | 19987.6 |
| uncharacterised protein | NCTC13639_02181 | Not Available | Positive | 2061354 - 2061524 | 6575.73 |
| Hypothetical protein | NCTC13639_02182 | Not Available | Positive | 2061636 - 2061842 | 6931.21 |
| Putative phage integrase | NCTC13639_02183 | Not Available | Positive | 2061946 - 2062950 | 38265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

