Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative antitoxin yfjz | NCTC13639_00845 | Not Available | Positive | 767546 - 767863 | 11870.2 |
| toxin ykfi | NCTC13639_00846 | Not Available | Positive | 767884 - 768225 | 13015.7 |
| uncharacterised protein | NCTC13639_00847 | Not Available | Positive | 768341 - 769174 | 31907.2 |
| Trna-met | Not Available | Not Available | Positive | 769277 - 769352 | Not Available |
| g/u mismatch-specific dna glycosylase | NCTC13639_00849 | Not Available | Positive | 769478 - 769984 | 18552.6 |
| putative outer membrane receptor | NCTC13639_00850 | Not Available | Negative | 770015 - 772012 | 74222.3 |
| pqq-dependent catabolism-associated beta-propeller protein | NCTC13639_00851 | Not Available | Negative | 772023 - 773072 | 38278.6 |
| rna polymerase sigma factor rpod | NCTC13639_00852 | Not Available | Negative | 773232 - 775079 | 70579.5 |
| dna primase | NCTC13639_00853 | Not Available | Negative | 775321 - 777066 | 65302.3 |
| 30s ribosomal protein s21 | NCTC13639_00854 | Not Available | Negative | 777304 - 777519 | 8500.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

