Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain | NCTC13639_00804 | Not Available | Negative | 728793 - 729497 | 27911.8 |
| ph-dependent sodium/proton antiporter | NCTC13639_00805 | Not Available | Negative | 729690 - 729923 | 8139.12 |
| ph-dependent sodium/proton antiporter | NCTC13639_00806 | Not Available | Negative | 729910 - 730842 | 32701.2 |
| isec14 transposase b | NCTC13639_00807 | Not Available | Negative | 731003 - 731182 | 6983.26 |
| iscro4 transposase | NCTC13639_00808 | Not Available | Negative | 731196 - 732266 | 39328.4 |
| transposase is116/is110/is902 family | NCTC13639_00809 | Not Available | Negative | 732587 - 733669 | 39980.5 |
| reverse transcriptase | NCTC13639_00811 | Not Available | Negative | 734210 - 735733 | 58635.5 |
| transposase and inactivated derivatives, is30 family | NCTC13639_00812 | Not Available | Positive | 736884 - 738035 | 44283.5 |
| isec14 transposase a | NCTC13639_00813 | Not Available | Negative | 737955 - 738293 | 12900.3 |
| gtp-binding protein | NCTC13639_00814 | Not Available | Positive | 738889 - 739752 | 31875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

