Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein family upf0102 | NCTC13639_00682 | Not Available | Negative | 602824 - 603219 | 14904.5 |
| lipoprotein | NCTC13639_00683 | Not Available | Negative | 603177 - 603641 | 16623.0 |
| lipoprotein | NCTC13639_00684 | Not Available | Negative | 603607 - 604776 | 41027.4 |
| lipoprotein | NCTC13639_00685 | Not Available | Negative | 604721 - 605230 | 18146.6 |
| ribosomal rna small subunit methyltransferase i | NCTC13639_00686 | Not Available | Positive | 605294 - 606157 | 31502.9 |
| tagatose-bisphosphate aldolase | NCTC13639_00687 | Not Available | Negative | 606213 - 607094 | 32151.5 |
| putative tagatose-6-phosphate ketose/aldose isomerase | NCTC13639_00688 | Not Available | Negative | 607107 - 608261 | 41659.7 |
| n-acetylglucosamine-6-phosphate deacetylase | NCTC13639_00689 | Not Available | Negative | 608563 - 609696 | 40721.2 |
| pts system iia component | NCTC13639_00690 | Not Available | Negative | 609693 - 610127 | 15606.8 |
| mannose-specific pts system eiid component | NCTC13639_00691 | Not Available | Negative | 610144 - 611022 | 31808.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

