Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimp | NCTC13639_00660 | Not Available | Positive | 582089 - 582541 | 16728.1 |
| transcription elongation factor nusa | NCTC13639_00661 | Not Available | Positive | 582570 - 584057 | 54952.1 |
| translation initiation factor if-2 | NCTC13639_00662 | Not Available | Positive | 584082 - 586772 | 97674.0 |
| ribosome-binding factor a | NCTC13639_00663 | Not Available | Positive | 586919 - 587323 | 15181.4 |
| trna pseudouridine synthase b | NCTC13639_00664 | Not Available | Positive | 587323 - 588267 | 35148.2 |
| polyribonucleotide nucleotidyltransferase | NCTC13639_00667 | Not Available | Positive | 589057 - 591189 | 76934.3 |
| lipoprotein nlpi | NCTC13639_00668 | Not Available | Positive | 591299 - 592183 | 33553.5 |
| atp-dependent rna helicase dead | NCTC13639_00669 | Not Available | Positive | 592363 - 594291 | 71937.0 |
| tryptophan permease | NCTC13639_00670 | Not Available | Positive | 594437 - 595681 | 44511.4 |
| monooxygenase | NCTC13639_00671 | Not Available | Negative | 595769 - 596776 | 37003.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

