Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stringent starvation protein a | NCTC13639_00597 | Not Available | Positive | 526522 - 527160 | 24364.4 |
| clpxp protease specificity-enhancing factor | NCTC13639_00598 | Not Available | Positive | 527166 - 527669 | 18361.4 |
| c4-dicarboxylate transporter | NCTC13639_00599 | Not Available | Negative | 527726 - 529093 | 48444.5 |
| transcriptional regulator nanr | NCTC13639_00600 | Not Available | Positive | 529463 - 530245 | 29496.0 |
| n-acetylneuraminate lyase | NCTC13639_00601 | Not Available | Positive | 530505 - 531398 | 32676.5 |
| putative sialic acid transporter | NCTC13639_00602 | Not Available | Positive | 531509 - 532999 | 53792.7 |
| n-acetylmannosamine kinase | NCTC13639_00603 | Not Available | Positive | 533106 - 533975 | 29585.7 |
| uncharacterized protein, yhch/yjgk/yial family | NCTC13639_00604 | Not Available | Positive | 533978 - 534445 | 17105.8 |
| cytosine deaminase | NCTC13639_00605 | Not Available | Negative | 534504 - 535784 | 47780.0 |
| cytosine permease | NCTC13639_00606 | Not Available | Negative | 535774 - 537024 | 43366.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

