Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | NCTC13639_00532 | Not Available | Negative | 466888 - 467835 | 34121.4 |
| peptide deformylase | NCTC13639_00533 | Not Available | Negative | 467850 - 468359 | 19286.4 |
| dna protecting protein dpra | NCTC13639_00534 | Not Available | Positive | 468489 - 469613 | 41244.6 |
| uncharacterized protein conserved in bacteria | NCTC13639_00535 | Not Available | Positive | 469585 - 470058 | 18453.1 |
| dna topoisomerase | NCTC13639_00536 | Not Available | Positive | 470085 - 470627 | 19963.2 |
| putative ribosome maturation factor | NCTC13639_00537 | Not Available | Positive | 470632 - 471204 | 20597.6 |
| shikimate 5-dehydrogenase | NCTC13639_00538 | Not Available | Positive | 471206 - 472027 | 29298.1 |
| protein of uncharacterised function (duf1488) | NCTC13639_00539 | Not Available | Positive | 472024 - 472281 | 9822.51 |
| transferase | NCTC13639_00540 | Not Available | Negative | 472257 - 472811 | 20037.1 |
| Trna-ile | Not Available | Not Available | Positive | 474894 - 474970 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

