Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 1952473 - 1952486 | Not Available |
| Site-specific integrase | FAP39_09655 | Not Available | - | 1961034 - 1962353 | 49076.9 |
| duf2924 domain-containing protein | FAP39_09660 | Not Available | - | 1962350 - 1962847 | 18987.8 |
| hypothetical protein | FAP39_09665 | Not Available | - | 1963206 - 1963937 | 27465.8 |
| Helix-turn-helix domain-containing protein | FAP39_09670 | Not Available | - | 1963939 - 1964616 | 24963.8 |
| hypothetical protein | FAP39_09675 | Not Available | + | 1964725 - 1965405 | 26188.9 |
| Hypothetical protein | FAP39_09680 | Not Available | + | 1965604 - 1965813 | 8351.18 |
| hypothetical protein | FAP39_09685 | Not Available | + | 1965813 - 1966121 | 10971.2 |
| hypothetical protein | FAP39_09690 | Not Available | + | 1966146 - 1966631 | 17433.7 |
| Putative atpase aaa | FAP39_09695 | Not Available | + | 1966628 - 1967476 | 30862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.