Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tape measure protein | FAP39_08695 | Not Available | + | 1766117 - 1766776 | 22570.0 |
| Tail protein | FAP39_08700 | Not Available | + | 1766795 - 1767427 | 23443.5 |
| Gene transfer agent | FAP39_08705 | Not Available | + | 1767427 - 1768311 | 32488.2 |
| Phage cell wall peptidase | FAP39_08710 | Not Available | + | 1768308 - 1768745 | 16203.4 |
| Tail protein | FAP39_08715 | Not Available | + | 1768745 - 1772662 | 141506.0 |
| hypothetical protein | FAP39_08720 | Not Available | + | 1772667 - 1772975 | 11871.5 |
| hypothetical protein | FAP39_08725 | Not Available | - | 1772956 - 1773156 | 7151.46 |
| Serine acetyltransferase | FAP39_08730 | Not Available | + | 1773379 - 1774182 | 29008.1 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | FAP39_08735 | Not Available | - | 1774244 - 1775560 | 45660.8 |
| Putative transketolase central region-containing protein | FAP39_08740 | Not Available | - | 1775574 - 1776941 | 48908.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.