Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | strain CL-ES2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | FAP39_06100 | Not Available | Negative | 1244128 - 1244934 | 30741.8 |
| abc transporter permease subunit | FAP39_06105 | Not Available | Negative | 1244931 - 1245815 | 33069.8 |
| transporter substrate-binding domain-containing protein | FAP39_06110 | Not Available | Negative | 1245874 - 1246599 | 25854.3 |
| atp-binding cassette domain-containing protein | FAP39_06115 | Not Available | Negative | 1246629 - 1247405 | 28553.2 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | FAP39_06120 | Not Available | Negative | 1247570 - 1248313 | 26924.0 |
| terb family tellurite resistance protein | FAP39_06125 | Not Available | Negative | 1248310 - 1248750 | 16017.8 |
| terb family tellurite resistance protein | FAP39_06130 | Not Available | Negative | 1248854 - 1249276 | 15556.8 |
| duf1330 domain-containing protein | FAP39_06135 | Not Available | Negative | 1249276 - 1249569 | 10617.5 |
| hypothetical protein | FAP39_06140 | Not Available | Negative | 1249586 - 1250284 | 24884.8 |
| ctp synthase | FAP39_06145 | Not Available | Negative | 1250409 - 1252052 | 60668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
