Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | FAP39_08645 | Not Available | + | 1758974 - 1760338 | 49794.4 |
| Portal protein | FAP39_08650 | Not Available | + | 1760463 - 1761668 | 43037.7 |
| hypothetical protein | FAP39_08655 | Not Available | + | 1761661 - 1761888 | 8658.59 |
| Putative prohead protease | FAP39_08660 | Not Available | + | 1761908 - 1762462 | 20172.0 |
| Phage major capsid protein | FAP39_08665 | Not Available | + | 1762498 - 1763682 | 41999.2 |
| Dna packaging/head-tail-connector | FAP39_08670 | Not Available | + | 1763830 - 1764423 | 21661.3 |
| head-tail adaptor protein | FAP39_08675 | Not Available | + | 1764420 - 1764758 | 12371.8 |
| P012 | FAP39_08680 | Not Available | + | 1764755 - 1765168 | 14696.4 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | FAP39_08685 | Not Available | + | 1765186 - 1765599 | 14311.7 |
| hypothetical | FAP39_08690 | Not Available | + | 1765602 - 1766113 | 17503.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.