Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Integrase | E0E99_12305 | Not Available | Positive | 2529501 - 2530580 | 41176.9 |
| Hypothetical protein | E0E99_12310 | Not Available | Negative | 2530972 - 2531310 | 12315.2 |
| copper resistance d family protein | E0E99_12315 | Not Available | Negative | 2531331 - 2532203 | 32602.7 |
| copc domain-containing protein yoba | E0E99_12320 | Not Available | Negative | 2532207 - 2532581 | 13002.5 |
| Putative dna polymerase | E0E99_12325 | Not Available | Positive | 2532725 - 2532955 | 8817.7 |
| carbon-nitrogen hydrolase family protein | E0E99_12330 | Not Available | Positive | 2533062 - 2533718 | 23839.5 |
| Exonuclease | E0E99_12335 | Not Available | Positive | 2533742 - 2534404 | 25086.4 |
| Attr | Not Available | Not Available | Positive | 2547712 - 2547726 | Not Available |
| Attl | Not Available | Not Available | Positive | 3170660 - 3170673 | Not Available |
| Phage integrase family protein | E0E99_15405 | Not Available | Negative | 3171018 - 3172037 | 39026.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

