Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron uptake transcriptional regulator | E0E99_03760 | Not Available | Positive | 784665 - 785111 | 16767.8 |
| tricarballylate utilization lysr family transcriptional regulator tcur | E0E99_03765 | Not Available | Positive | 785240 - 786166 | 33549.9 |
| fad-dependent tricarballylate dehydrogenase tcua | E0E99_03770 | Not Available | Positive | 786264 - 787667 | 51124.6 |
| tricarballylate utilization 4fe-4s protein tcub | E0E99_03775 | Not Available | Positive | 787654 - 788793 | 41876.9 |
| mfs transporter | E0E99_03780 | Not Available | Positive | 788847 - 789515 | 23843.5 |
| hypothetical protein | E0E99_03785 | Not Available | Negative | 789567 - 789899 | 12153.5 |
| chitoporin | E0E99_03790 | Not Available | Negative | 789949 - 791355 | 52726.7 |
| glutamine--trna ligase | E0E99_03800 | Not Available | Negative | 791791 - 793458 | 63567.3 |
| pts n-acetyl glucosamine transporter subunit iiabc | E0E99_03805 | Not Available | Negative | 793645 - 795594 | 68103.8 |
| glucosamine-6-phosphate deaminase | E0E99_03810 | Not Available | Positive | 795937 - 796737 | 29632.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

