Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | E0E99_03610 | Not Available | Negative | 754307 - 756073 | 64338.5 |
| succinate dehydrogenase membrane anchor subunit | E0E99_03615 | Not Available | Negative | 756073 - 756420 | 12796.1 |
| succinate dehydrogenase cytochrome b556 subunit | E0E99_03620 | Not Available | Negative | 756414 - 756803 | 14253.1 |
| citrate synthase | E0E99_03625 | Not Available | Positive | 757516 - 758799 | 48096.8 |
| abrb family transcriptional regulator | E0E99_03630 | Not Available | Positive | 758975 - 760021 | 37010.2 |
| endonuclease viii | E0E99_03635 | Not Available | Negative | 760018 - 760809 | 29738.7 |
| pyroglutamyl-peptidase i | E0E99_03640 | Not Available | Negative | 760824 - 761468 | 22142.8 |
| duf979 domain-containing protein | E0E99_03645 | Not Available | Negative | 761478 - 762473 | 35707.7 |
| duf969 domain-containing protein | E0E99_03650 | Not Available | Negative | 762470 - 763192 | 25878.3 |
| 5-oxoprolinase subunit pxpa | E0E99_03655 | Not Available | Negative | 763246 - 763980 | 25676.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

