Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator nhar | E0E99_03560 | Not Available | Positive | 740143 - 741042 | 34042.9 |
| glycoside hydrolase family 31 protein | E0E99_03565 | Not Available | Negative | 741092 - 743131 | 78652.1 |
| mfs transporter | E0E99_03570 | Not Available | Negative | 743172 - 744545 | 50109.2 |
| uroporphyrinogen-iii c-methyltransferase | E0E99_03575 | Not Available | Positive | 745126 - 745914 | 28384.6 |
| helix-turn-helix domain-containing protein | E0E99_03580 | Not Available | Negative | 745893 - 746783 | 34137.0 |
| succinate--coa ligase subunit alpha | E0E99_03585 | Not Available | Negative | 747009 - 747878 | 29807.3 |
| adp-forming succinate--coa ligase subunit beta | E0E99_03590 | Not Available | Negative | 747878 - 749044 | 41388.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | E0E99_03595 | Not Available | Negative | 749135 - 750358 | 44254.2 |
| 2-oxoglutarate dehydrogenase e1 component | E0E99_03600 | Not Available | Negative | 750373 - 753174 | 104780.0 |
| succinate dehydrogenase iron-sulfur subunit | E0E99_03605 | Not Available | Negative | 753575 - 754291 | 26715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

